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Meeting:

SPARC OS Technical Committee

Date:

Time:

2:00 pm - 2:30 pm

MUSC

Brigette, Greg

Iowa

Samantha

LA CaTS

Ying

Children’s National

Case Western

OHSU

Stony Brook Medicine

Morehouse

Helen

Agenda

Last Meeting’s Minutes

Discussion:

Institutional Updates:

Louisiana Clinical & Translational Science Center: 

11/20/2024

  • Out of the office

12/18/2024

  • Using config/environments/testing.rb because config/environments/staging.rb threw error -

DEBUG [e617bc78]       Uglifier::Error: Unexpected token: keyword (const). To use ES6 syntax, harmony mode must be enabled with
Uglifier.new(:harmony => true). (Uglifier::Error)
--
412       SparkMD5.ArrayBuffer.hash = function(arr, raw) {
413         var hash = md51_array(new Uint8Array(arr)), ret = hex(hash);
414         return raw ? hexToBinaryString(ret) : ret;
415       };
416       return SparkMD5;
417     }));
418   })(sparkMd5);
419   var SparkMD5 = sparkMd5.exports;
  =>   const fileSlice = File.prototype.slice || File.prototype.mozSlice || File.prototype.webkitSlice;
421   class FileChecksum {
422     static create(file, callback) {
423       const instance = new FileChecksum(file);
424       instance.create(callback);
425     }4%)
426     constructor(file) {
427       this.file = file;
428       this.chunkSize = 2097152;
==
DEBUG [e617bc78]       /var/www/rails/sparc-rails/shared/bundle/ruby/3.3.0/gems/uglifier-4.2.0/lib/uglifier.rb:291:in `parse_re
sult'
/var/www/rails/sparc-rails/shared/bundle/ruby/3.3.0/gems/uglifier-4.2.0/lib/uglifier.rb:221:in `run_uglifyjs'
  • did MUSC have errors? which config did MUSC use?


MUSC:

12/18/2024

  • Update

    • RMID v1.7.0 Released - Nov 24, 2024

    • Migration to Pivotal Tracker (going away end of April 2025) to Jira is underway. Also working toward cleaning up current story lists, so review requests may be more frequent as we determine study priorities and what will move into Jira.

  • Upcoming Releases

    • SPARC v3.13.0 - Ruby 3.3.1 & Ruby Rails 7.0.8.1 upgrades - Early Winter 2025

      • Working on these upgrades with server change; issues resolution

    • SPARCFulfillment v3.6.0 Release - Winter 2025

    • SPARC v3.14.0 Release - Spring 2025


Oregon Health & Science University:

11/20/2024

  • No SPARC updates

12/18/2024

  • Not in attendance


Iowa

11/20/2024

  • Not in attendance

  • 12/18/2024

    • On CWF v3.1 moving to v3.4. Mentioned aware of 3.5.0 also released, and made aware during meeting that v.3.6.0 will be released in a few months.

    • On SPARC v3.7, moving to v3.12

    • Also working on server upgrade


Case Western

11/20/2024

  • No SPARC updates

12/18/2024

  • Not in attendance


Children’s National

11/20/2024

  • Not in attendance

12/18/2024

  • Not in attendance


Stony Brook:

11/20/2024

  • Not in attendance

12/18/2024

  • Not in attendance


Morehouse:

11/20/2024

  • Able to get Fulfillment set up from resources received

  • Gained access to a SPARC test environment, so working on accessing it

May reach out for SPARC training as a refresher and since there’s a larger institutional interest in using it

12/18/2024

  • No new SPARC activity in terms of usage

    • Working with Biomedical Informatics (BI) Core on getting their services in SPARC

    • Plan to release after getting BI core in place

    • Will review training resources and reach out if refresher needed

  • Should have their test environment ready

  • Ruvina will reach out with questions about Fulfillment if needed

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